Poster Presentation The 42nd Lorne Conference on Protein Structure and Function 2017

Structure and dynamic determinants of the specificity of a synthetic serpin (#211)

Emilia M Marijanovic 1 , James Fodor 1 , Shani Keleher 1 , Benjamin T Porebski 2 , Mary Pearce 1 , James Irving 3 , Sheena McGowan 1 , Ashley M Buckle 1
  1. Monash Univserity, Clayton, VICTORIA, Australia
  2. Laboratory of Molecular Biology, Medical Research Council, Cambridge, United Kingdom
  3. University Collage, London, United Kingdom

Serine protease inhibitors (serpins) are the largest family of protease inhibitors. They have evolved to inhibit a specific serine protease in many important biological functions. The serpin’s specificity is believed to reside in the reactive center loop, a protruding loop where the target serine protease binds and cleaves. Previously, we have created a synthetic, active serpin-conserpin- that is significantly more stable and less prove to misfolding and aggregation than a typical serpin (Porebski et al. 2016). Here, we used conserpin to explore what structural and dynamic requirements are necessary for a serpin’s specificity to a target protease. Conserpin’s reactive center loop was mutated to match that of alpha1-antitrypsin (a1-AT). This new conserpin retained its thermostability, but did not contain a1-AT specificity. Determination of its X-ray crystallography structure, followed by molecular dynamics studies, suggest that a serpin’s specificity is dependent on the relationship between its structure and dynamics in regions not only within the reactive center loop, but regions of serpin’s body that this loop interacts with.